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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818400.1_cds_XP_016499617.1_13523
CDS Infomation

[gene=LOC107818185] [db_xref=GeneID:107818185] [protein=DNA (cytosine-5)-methyltransferase DRM2-like] [protein_id=XP_016499617.1] [location=join(14069..14071,14147..14275,14452..14548,14774..14820,15992..16096,16899..16998,17242..17357,17803..17905,18086..18153,18689..20038)] [gbkey=CDS]
Sequence

ATGTGTGAGTTACCAGAATATTCAGATAGTGAAAATTCTTCGAAGCCCGAAGGTGTGAGT
GGAATCATGCCTAAAGTTGAAGATCCATATTGTGAATTTCCATCTCTATACACATATACA
AGGCCTACAGGGGACAATATTGCAAGCTCATCAGGCAGCAGTGTGAGATCATCTCTTCTG
GCTATGGGTTTCAATGCATCACTTGTTGACAAAGCAATTGAGGAAAATGGTGAAGACAAC
ATTGACTTGTTACTGGAGACGCTTGTTGCAAATTCTGATCCTCCTAGAGCAGAATCGTCA
GATTCTCTGGATAGCTTGTTTGGTGATGATGAGGACACAAACAGTTCTGCCAAGTTTGAC
GGAGGTGTACATATAAAAGAGGAGCCTGATCCTTGTGGTGGAGTTCATGATGACAAGAGA
GCATCTTTATTAGCAATGAGTTTCTCTTTGGACGAAGTCGAATTTGCTATCGGTAAACTT
GGTGAAGCTGCTCCTGTCAACGAACTAGTGAATGTAATCTTTGCTGCTCGAATAGCTCAA
AATTGTAAAAAAGATGACGGTGATGATTCTGTTGTTGAGATTAAAGAATGGATCAAGGAA
TGCAGCACCGAGGCTATGTTTAAGATCATGGAGAAGACATTAAAATTGCTTGAAATGGGT
TTCTCTGAGAATGAAGTTTCTGCAGTTATTGAGAAGTATGGTTCTGAAGTTCCTCTTGAA
GAGCTTGCAAATTCAATTATAGATCCTAGTAGTGGACGAATGAACAAGCATCTCTTAAAC
TCTCTCGGCAGGAATGGTTCAATTGGATTTCATCCACTAGCTGTTAAGAAAGAGGAATGT
GATCTGGATACCTCTGAATCTAGAGACCTTAACCTACTGGAAAAGCTTAAAGGGAAACGG
CCAAAGGAGAACTATATTAATGAGATAGGCACTTTAAAAAGACCGAAACCAGAGTTTGAT
GAAGCCTTTAGCAGTTCTCTTGGCCCTGCATGGCAAGAAATGACCACTAGAAACTTAGGG
CCATTCAACACCACGAGGACTCCGGTTTCTCGAAGAGCAATTCACCAAAGATCAAGAGTG
CTGGATTGCCAAGAGACACCGAAATTGTCTATGCCCAAATCATGCAGGACCCTTGATAAG
GAAGCGGCTAAAGCTCCCTATTTCTTTTATGGGAATGTAATGAACTTATCTCACGACTCT
TGGGTAAGAATCTCTCAGTTTTTGCATGCCATTGAGCCAGAATTTGTTAATACTCAACTT
TTCTCAGCTCTGAGTCGTAAAGAAGGTTATGTACATAATCTTCCTACTGAAAATCGATTT
CACATTGTTCCAAAACCACCAATGACAATTCAAGAAGCAGTTCCTAATAGCAAAAAATGG
TGGCCATCATGGGATACCAGACAACACTTGAGCTGCATCAATTCTGAGACTTCTTGTATA
TCTCAGCTTTGTGATAGGCTTGAAAGAACAGTAAGTGATTCCCAGGGGTTTCCTGCAGTT
GACAGACAGAGGGATATCCTCCACCAGTGCCAGATATTGAATCTAGTCTGGGTTGGTCGC
TACAAATTGGCACCTGTAGGGCCAGAACAAATAGAACGCATTCTTGGCTACCCAGAAAAT
CACACTCGAAATGCTGGGTTTAGCCTGATGGAAAGACTTCTATCGCTGAAACATTGCTTC
CAGATAGATACATTGGCTTATCGTCTCTCTGTATTGAAGTCTCTGTACCCTGGAGGATTG
ACAGTTTTGTCAATCTTTACCGGAACTGGTGGAGCTGAAATTGCATTGCATCGCCTTGGA
ATTCGCTTAAAAGTTGTTGTCTCCGTTGAGGCTTCTGAGAAAAACCGGAGAATTCTCAAG
CAATGGTGGAGTAGTTCGGGACAAACAGGAGAACTTGTGCAGATTGAAGACATTCAGAAG
TTGACCAGTAACAAGGTAGAGGTCTTGATAAAGAAGTTTGGTGGTTTTGATTTCATCATA
TGCCAGAGTCCATGTACATACTCTTCTAAAGGTAATTTATTTGCAGATACTGATAGTCAT
GCAAGTTTAGATTTCATGTTGTTTCACGAGTTTGTGCGTGTCCTGCAACGTGTAAGAAAT
GCAATGGGGCGAAACTAA

Peptide Sequence

PEP ID

XP_016499617.1
PEP Infomation

PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Nicotiana tabacum]
Sequence

MCELPEYSDSENSSKPEGVSGIMPKVEDPYCEFPSLYTYTRPTGDNIASSSGSSVRSSLL
AMGFNASLVDKAIEENGEDNIDLLLETLVANSDPPRAESSDSLDSLFGDDEDTNSSAKFD
GGVHIKEEPDPCGGVHDDKRASLLAMSFSLDEVEFAIGKLGEAAPVNELVNVIFAARIAQ
NCKKDDGDDSVVEIKEWIKECSTEAMFKIMEKTLKLLEMGFSENEVSAVIEKYGSEVPLE
ELANSIIDPSSGRMNKHLLNSLGRNGSIGFHPLAVKKEECDLDTSESRDLNLLEKLKGKR
PKENYINEIGTLKRPKPEFDEAFSSSLGPAWQEMTTRNLGPFNTTRTPVSRRAIHQRSRV
LDCQETPKLSMPKSCRTLDKEAAKAPYFFYGNVMNLSHDSWVRISQFLHAIEPEFVNTQL
FSALSRKEGYVHNLPTENRFHIVPKPPMTIQEAVPNSKKWWPSWDTRQHLSCINSETSCI
SQLCDRLERTVSDSQGFPAVDRQRDILHQCQILNLVWVGRYKLAPVGPEQIERILGYPEN
HTRNAGFSLMERLLSLKHCFQIDTLAYRLSVLKSLYPGGLTVLSIFTGTGGAEIALHRLG
IRLKVVVSVEASEKNRRILKQWWSSSGQTGELVQIEDIQKLTSNKVEVLIKKFGGFDFII
CQSPCTYSSKGNLFADTDSHASLDFMLFHEFVRVLQRVRNAMGRN

Transcript Sequence

Gene sequence data has not been registered.